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Streamlined processing and analysis of 16S rRNA amplicon sequencing data with OCMS_16S and OCMSlooksy

Journal article

Yen S. et al, (2022), Wellcome open research, 7, 68 - 68

Recent advances and future directions in microbiome metabolomics

Journal article

Misheva M. et al, (2021), Current opinion in endocrine and metabolic research

THE MICROBIOLOGY OF PLEURAL INFECTION, AN APPROACH BASED ON 16S RRNA GENE NEXT GENERATION SEQUENCING

Conference paper

Kanellakis NI. et al, (2019), Thorax, 74, A10 - A10

Host-microbial crosstalk in the pathogenesis of inflammation and cancer in Primary Sclerosing Cholangitis (PSC)

Conference paper

Neyazi M. et al, (2019), European journal of immunology, 49, 941 - 941

CGAT-core: a python framework for building scalable, reproducible computational biology workflows

Journal article

Cribbs AP. et al, (2019), F1000research, 8, 377 - 377

The Short Chain Fatty Acid Butyrate Imprints an Antimicrobial Program in Macrophages.

Journal article

Schulthess J. et al, (2019), Immunity, 50, 432 - 445.e7

Alpha kinase 1 controls intestinal inflammation by suppressing the IL-12/Th1 axis.

Journal article

Ryzhakov G. et al, (2018), Nat commun, 9

Foxp3+ T reg cells control psoriasiform inflammation by restraining an IFN-I-driven CD8+ T cell response.

Journal article

Stockenhuber K. et al, (2018), J exp med, 215, 1987 - 1998

A Large Polysaccharide Produced by Helicobacter hepaticus Induces an Anti-inflammatory Gene Signature in Macrophages.

Journal article

Danne C. et al, (2017), Cell host microbe, 22, 733 - 745.e5

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