Spectral Imaging Toolbox
Aron M., Browning R., Carugo D., de la Serna JB., Eggeling C., Stride E.
NB: This dataset has since been superseded by Spectral Imaging Toolbox v1.0 (DOI: 10.5287/bodleian:gp8XN80Pw). The Spectral Imaging Toolbox is designed to facilitate batch processing and analysis of image stacks and hyperstacks produced by spectral imaging. Key highlights include reliable membrane segmentation, batch processing, 3D reconstruction, spectra generation, generalized polarization (GP) maps and histograms, GP calibration factor, and .xls summary output. Demo images and instructions as well as a .pdf user manual are included in the download. Note: the Spectral Imaging Toolbox requires MATLAB and the MATLAB Image Processing Toolbox.