Contact information
Chen-Yi Wang
Senior Research Associate
My research journey began with a fascination for chromatin biology and epigenetics, driven by a desire to understand how chromatin structure and epigenetic modifications regulate gene expression and shape cellular functions. This curiosity gradually led me to expand beyond traditional wet-lab research into the computational analysis of genomic data, bridging experimental and bioinformatic approaches.
After training as a molecular and cellular biologist, I developed strong expertise in next-generation sequencing (NGS)and later joined Professor Oppermann’s group at the Botnar Research Centre in 2017, where I further strengthened my computational skills through the Computational Genomics Analysis and Training (CGAT) program.
Today, my work integrates experimental and computational genomics to investigate tumour biology, applying bioinformatic methods on NGS, long-read sequencing, single-cell and spatial transcriptomics to uncover disease-associated mechanisms and the molecular pathways that drive cancer progression.
Looking ahead, I aim to combine genomics, transcriptomics, proteomics, and spatial data to reveal disease heterogeneity and microenvironmental complexity, ultimately contributing to the discovery of new therapeutic targets and advancing precision medicine.
Recent publications
Belantamab Mafodotin Triggers Immune Invigoration in Multiple Myeloma Via Inflammatory and Immunogenic Cell Death
Preprint
Watson ECR. et al, (2025)
Biomolecular tracking by FIRESCAPE reveals distinct modes of clearance, damage induction and cellular uptake for extracellular histone H3
Preprint
Josephson B. et al, (2025)
A systems-based approach to uterine fibroids identifies differential splicing associated with abnormal uterine bleeding.
Journal article
Wang C-Y. et al, (2025), Commun Med (Lond), 5
The human milk oligosaccharide 3'sialyllactose reduces low-grade inflammation and atherosclerosis development in mice.
Journal article
Pessentheiner AR. et al, (2024), JCI Insight, 9